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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015934015.1_cds_XP_016480162.1_71630
CDS Infomation

[gene=LOC107801366] [db_xref=GeneID:107801366] [protein=putative late blight resistance protein homolog R1A-3] [protein_id=XP_016480162.1] [location=join(31..293,371..1475,1982..1987)] [gbkey=CDS]
Sequence

ATGGGAGTATTTCCAGAGGACAGAGAGATTCAAGTCTCAAAATTAACATGGTTGTGGATA
GCCGAGGGTTTGATTAACACGGACATGGAGAAGCTTTCTGAGGATATAGCAAAATTTTAC
TTGGAGAATCTTATTGGGAGAAATCTAGTGATGGTTGCTAAAAAGAGCTCTGATGGAAGC
ATCAAAACATGTCGCATTCATGACCTGGTGCTTGAATTTTGCATGAAGAAAGCGAAGTTG
GAGAACTTTTTAGAAACGATAAGGGACAGAGGTTCACATCCTTCTCAATTTTTCCCTCCA
ATGTGCAATACTTCACGCCGCTTATGCCTTTATTCTCACAGTGAAAATCTTCCAAAATGG
TGTTTGTTTTTCTCCCATGTGAAATCTTTCCAGTTCAGGGAGGCAAGAAATATTGCATTC
TCTTCAATAGACTGTGTTTCAAACACTTTTAAAAGATTCAAGTTTCTAAGGGTGTTAGAC
TTTGAATTCACCATTATTGATTCTATCCCACAAGAATTAACCCTTTTGAAGTATCTTGCT
TTTCGGACTGCAGAAGATGCATTATCACTCCCGGACAATCTTCGTAACCTTGAAACATTG
GTAGTTCAAGGACTTAGAGGACGAGTATCACTATCAGATACCATTTGGAAGATGGTTAAG
TTGCGGCATCTTCACATCTATGATCGAGCATTCTTCACTTTGAACAGTGGAGAAAAATTC
TCAGAATGCGACTCGACAATGGTTAATTTGCAAACTGTTTCCTCAGCATGTTTTTCTTGT
GTGGACAATGCCGATAAGATCCTTGAGAAGGCACCAAATCTTCGGAAACTGAGATGTGAA
GTTTCCAAATTTGATGGCTCGTTTCCTGCATTTAGCACTCTTACAAAGCTTGAAATGCTC
AAGGTTTCTTCCGGTACTACATTGACTTGGATCAATCAGTTGAAGTTACCATCAAGCTTA
AAGAAGTTGACACTGTCCAATTTTCGCATACATCTTACTGAAGTTGCAACCCATCCAAAA
CTTGAGGTACTCAAGCTACTAGGAGTTACCATTAGTTCCAATGTATGGGAAGTGAATGAT
GAGCAGTTCCCTCAACTCAAATTCTTGAAATTAGAAAATCCTTCTTTTTCAAAATGGGAT
GCCTCAGATTATGCCTTTCCATTCCTTGAACACTTGGTATTGAAAAAATGCCGCTATCTT
AAGGAGTTCCCTCCTCGTTTTGAGGATGCCTCGTCTCTGAAATCAGTTGAGATAATATCG
TGCAATGAAGAACTTGTCAAGTCAGCCGAGGCCGTCAGGGAAGAATTAGATGGAATGTCG
GGAAGCTCTGGTTTCAAGGTCATCATCCGCAAGCAGCAAAACAATAGGATTTGA

Peptide Sequence

PEP ID

XP_016480162.1
PEP Infomation

PREDICTED: putative late blight resistance protein homolog R1A-3 [Nicotiana tabacum]
Sequence

MGVFPEDREIQVSKLTWLWIAEGLINTDMEKLSEDIAKFYLENLIGRNLVMVAKKSSDGS
IKTCRIHDLVLEFCMKKAKLENFLETIRDRGSHPSQFFPPMCNTSRRLCLYSHSENLPKW
CLFFSHVKSFQFREARNIAFSSIDCVSNTFKRFKFLRVLDFEFTIIDSIPQELTLLKYLA
FRTAEDALSLPDNLRNLETLVVQGLRGRVSLSDTIWKMVKLRHLHIYDRAFFTLNSGEKF
SECDSTMVNLQTVSSACFSCVDNADKILEKAPNLRKLRCEVSKFDGSFPAFSTLTKLEML
KVSSGTTLTWINQLKLPSSLKKLTLSNFRIHLTEVATHPKLEVLKLLGVTISSNVWEVND
EQFPQLKFLKLENPSFSKWDASDYAFPFLEHLVLKKCRYLKEFPPRFEDASSLKSVEIIS
CNEELVKSAEAVREELDGMSGSSGFKVIIRKQQNNRI

Transcript Sequence

Gene sequence data has not been registered.